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Misc enhancements (#9)

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* deploy docs only for main

* Revert "deploy docs only for main"

This reverts commit 53e37bd8a43e7e20d5a64bed1b3e00ced551dcae.

* init czi specific view

* fix build
This commit is contained in:
m-aXimilian
2025-09-25 19:25:17 +02:00
committed by Maximilian Kueffner
parent 22fd65773d
commit e60203b57d
10 changed files with 180 additions and 50 deletions
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lib/imaging/impl/PixelariumCzi.cpp
+17 -15
View File
@@ -5,6 +5,22 @@
#include "libCZI.h"
pixelarium::imaging::PixelariumCzi::PixelariumCzi(const std::string& uri)
{
if (!std::filesystem::exists(uri))
{
throw std::runtime_error("Render file not found.");
}
this->is_empty_ = false;
this->uri_ = std::filesystem::path(uri);
auto stream = libCZI::CreateStreamFromFile(this->uri_.wstring().c_str());
this->czi_reader_ = libCZI::CreateCZIReader();
this->czi_reader_->Open(stream);
this->image_statistics_ = this->czi_reader_->GetStatistics();
}
std::unique_ptr<cv::Mat> CZISubBlockToCvMat(std::shared_ptr<libCZI::IBitmapData> bitmap, libCZI::PixelType pixeltype)
{
size_t pixel_size{0};
@@ -81,23 +97,9 @@ std::unique_ptr<cv::Mat> CZISubBlockToCvMat(std::shared_ptr<libCZI::IBitmapData>
return fill_mat;
}
pixelarium::imaging::PixelariumCzi::PixelariumCzi(const std::string& uri)
{
if (!std::filesystem::exists(uri))
{
throw std::runtime_error("Render file not found.");
}
this->is_empty_ = false;
this->uri_ = std::filesystem::path(uri);
}
std::unique_ptr<cv::Mat> pixelarium::imaging::PixelariumCzi::TryGetImage()
{
auto stream = libCZI::CreateStreamFromFile(this->uri_.wstring().c_str());
auto cziReader = libCZI::CreateCZIReader();
cziReader->Open(stream);
auto block = cziReader->ReadSubBlock(0);
auto block = this->czi_reader_->ReadSubBlock(0);
auto bitmap = block->CreateBitmap();
auto res = CZISubBlockToCvMat(bitmap, block->GetSubBlockInfo().pixelType);